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  5. Cre05.g236250

Cre05.g236250


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_42_0003601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre05.g236250
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00001231.5 No alias (at2g41500 : 90.1) Encodes LACHESIS (LIS), a protein... 0.02 Orthogroups_2024-Update
evm.model.tig00020710.48 No alias (at5g52820 : 200.0) WD-40 repeat family protein /... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1928 1964
IPR001680 WD40_repeat 1551 1599
IPR001680 WD40_repeat 2070 2104
IPR001680 WD40_repeat 1886 1920
IPR001680 WD40_repeat 1604 1641
IPR001680 WD40_repeat 1645 1683
IPR001680 WD40_repeat 1982 2017
IPR001680 WD40_repeat 1785 1820
IPR001680 WD40_repeat 2111 2147
IPR001680 WD40_repeat 1703 1733
IPR001680 WD40_repeat 1836 1865
IPR001680 WD40_repeat 1742 1778
IPR001680 WD40_repeat 1514 1545
No external refs found!