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  5. Cre05.g241300

Cre05.g241300


Description : small nuclear ribonucleoprotein F


Gene families : OG_42_0004642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre05.g241300
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
228181 No alias small nuclear ribonucleoprotein F 0.04 Orthogroups_2024-Update
At4g30220 No alias Small nuclear ribonucleoprotein F... 0.02 Orthogroups_2024-Update
GRMZM2G168252 No alias small nuclear ribonucleoprotein F 0.02 Orthogroups_2024-Update
Glyma.17G063100 No alias small nuclear ribonucleoprotein F 0.02 Orthogroups_2024-Update
Kfl00565_0010 kfl00565_0010_v1.1 (at4g30220 : 147.0) small nuclear ribonucleoprotein F... 0.02 Orthogroups_2024-Update
PSME_00044685-RA No alias (at4g30220 : 156.0) small nuclear ribonucleoprotein F... 0.05 Orthogroups_2024-Update
evm.model.tig00000944.19 No alias (at4g30220 : 128.0) small nuclear ribonucleoprotein F... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 12 74
No external refs found!