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  5. Cre06.g261450

Cre06.g261450


Description : high mobility group


Gene families : OG_42_0000453 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre06.g261450
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At1g20696 No alias high mobility group B3 [Source:TAIR;Acc:AT1G20696] 0.01 Orthogroups_2024-Update
Brara.B03718.1 No alias DNA bending architectural protein *(HMG-B) 0.02 Orthogroups_2024-Update
Brara.I00619.1 No alias DNA bending architectural protein *(HMG-B) 0.02 Orthogroups_2024-Update
Glyma.01G116000 No alias high mobility group B1 0.01 Orthogroups_2024-Update
Kfl00271_0080 kfl00271_0080_v1.1 (at5g23420 : 89.4) Encodes HMGB6, a protein belonging to... 0.01 Orthogroups_2024-Update
MA_86565g0010 No alias (at5g23420 : 100.0) Encodes HMGB6, a protein belonging... 0.03 Orthogroups_2024-Update
Sobic.006G179800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.007G000500.1 No alias DNA bending architectural protein *(HMG-B) 0.02 Orthogroups_2024-Update
Solyc04g008820 No alias High mobility group protein (AHRD V3.3 *-* O49948_SOLTU) 0.02 Orthogroups_2024-Update
Sopen02g027450 No alias HMG (high mobility group) box 0.02 Orthogroups_2024-Update
evm.model.tig00001339.6 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000818 nuclear MIS12/MIND complex IEP Predicted GO
CC GO:0000940 condensed chromosome outer kinetochore IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
CC GO:0005874 microtubule IEP Predicted GO
CC GO:0005876 spindle microtubule IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
CC GO:0099080 supramolecular complex IEP Predicted GO
CC GO:0099081 supramolecular polymer IEP Predicted GO
CC GO:0099512 supramolecular fiber IEP Predicted GO
CC GO:0099513 polymeric cytoskeletal fiber IEP Predicted GO
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 61 128
No external refs found!