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  5. Cre06.g275650

Cre06.g275650


Description : PAM domain (PCI/PINT associated module) protein


Gene families : OG_42_0003582 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre06.g275650
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At1g20200 No alias 26S proteasome non-ATPase regulatory subunit 3 homolog A... 0.02 Orthogroups_2024-Update
Bradi1g71600 No alias PAM domain (PCI/PINT associated module) protein 0.06 Orthogroups_2024-Update
Bradi4g36700 No alias PAM domain (PCI/PINT associated module) protein 0.03 Orthogroups_2024-Update
Glyma.04G021500 No alias PAM domain (PCI/PINT associated module) protein 0.01 Orthogroups_2024-Update
Glyma.06G021600 No alias PAM domain (PCI/PINT associated module) protein 0.02 Orthogroups_2024-Update
Glyma.14G221600 No alias PAM domain (PCI/PINT associated module) protein 0.03 Orthogroups_2024-Update
Kfl00058_0300 kfl00058_0300_v1.1 (p93768|psmd3_tobac : 467.0) Probable 26S proteasome... 0.03 Orthogroups_2024-Update
LOC_Os09g37000 No alias 26S proteasome non-ATPase regulatory subunit 3,... 0.01 Orthogroups_2024-Update
MA_8584g0010 No alias (q06364|psmd3_dauca : 556.0) Probable 26S proteasome... 0.04 Orthogroups_2024-Update
Potri.004G176600 No alias PAM domain (PCI/PINT associated module) protein 0.01 Orthogroups_2024-Update
Seita.2G292200.1 No alias regulatory component *(RPN3) of 26S proteasome 0.06 Orthogroups_2024-Update
Seita.6G240800.1 No alias regulatory component *(RPN3) of 26S proteasome 0.04 Orthogroups_2024-Update
Sobic.007G176200.1 No alias regulatory component *(RPN3) of 26S proteasome 0.06 Orthogroups_2024-Update
Solyc01g111710 No alias PCI superfamily protein 0.01 Orthogroups_2024-Update
Sopen01g053750 No alias Proteasome regulatory subunit C-terminal 0.03 Orthogroups_2024-Update
evm.model.contig_2049.1 No alias (p93768|psmd3_tobac : 340.0) Probable 26S proteasome... 0.02 Orthogroups_2024-Update
evm.model.tig00020614.5 No alias (p93768|psmd3_tobac : 370.0) Probable 26S proteasome... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEA InterProScan predictions
MF GO:0030234 enzyme regulator activity IEA InterProScan predictions
BP GO:0042176 regulation of protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000717 PCI_dom 315 414
IPR013586 26S_Psome_reg_C 421 487
No external refs found!