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Description : Pectate lyase (AHRD V3.3 *** M1BAL5_SOLTU)
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc09g061890 | |
| Cluster | HCCA clusters: Cluster_265 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16129 | No alias | putative pectate lyase 18 | 0.03 | Orthogroups_2024-Update | |
| A4A49_26358 | No alias | putative pectate lyase p18 | 0.04 | Orthogroups_2024-Update | |
| A4A49_35525 | No alias | putative pectate lyase 16 | 0.03 | Orthogroups_2024-Update | |
| Brara.B00588.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.F02217.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.G01649.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.G02558.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.05 | Orthogroups_2024-Update | |
| Brara.K01484.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G044000 | No alias | Pectin lyase-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.11G244900 | No alias | Pectate lyase family protein | 0.04 | Orthogroups_2024-Update | |
| MA_10430145g0020 | No alias | (at5g48900 : 488.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| MA_10430145g0030 | No alias | (at4g13210 : 482.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00023843-RA | No alias | (at4g13710 : 610.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00029400-RA | No alias | (at5g63180 : 504.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00046555-RA | No alias | (at4g24780 : 518.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G007400 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G064500 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s84_82V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
| Pp1s92_84V6 | No alias | F12A21.12; pectate lyase family protein [Arabidopsis thaliana] | 0.03 | Orthogroups_2024-Update | |
| Solyc03g071570 | No alias | Pectate lyase (AHRD V3.3 *** K4BHI7_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Sopen02g038070 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Predicted GO |
| MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
| BP | GO:0006887 | exocytosis | IEP | Predicted GO |
| BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
| CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
| BP | GO:0046903 | secretion | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 174 | 355 |
| No external refs found! |