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  5. Solyc09g064410

Solyc09g064410


Description : 50S ribosomal protein L33, chloroplastic (AHRD V3.3 *** RK33_SOLTU)


Gene families : OG_42_0003216 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g064410
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
PSME_00003198-RA No alias (q7gud1|rk33_pinko : 133.0) Chloroplast 50S ribosomal... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001705 Ribosomal_L33 9 65
No external refs found!