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  5. Cre08.g385200

Cre08.g385200


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_42_0004050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre08.g385200
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Brara.G00127.1 No alias component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.03 Orthogroups_2024-Update
Glyma.17G067100 No alias Small nuclear ribonucleoprotein family protein 0.02 Orthogroups_2024-Update
Kfl00309_0130 kfl00309_0130_v1.1 (at4g30330 : 159.0) Small nuclear ribonucleoprotein... 0.02 Orthogroups_2024-Update
LOC_Os02g03440 No alias LSM domain containing protein, expressed 0.01 Orthogroups_2024-Update
Mp5g07450.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.02 Orthogroups_2024-Update
PSME_00033648-RA No alias (at4g30330 : 159.0) Small nuclear ribonucleoprotein... 0.03 Orthogroups_2024-Update
Potri.006G174000 No alias Small nuclear ribonucleoprotein family protein 0.03 Orthogroups_2024-Update
Solyc06g072280 No alias Small nuclear ribonucleoprotein family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 18 83
No external refs found!