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  5. Cre09.g396400

Cre09.g396400


Description : related to ubiquitin 1


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre09.g396400
Cluster HCCA clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
162003 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
173723 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
19615 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
228943 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
At1g31340 No alias RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2] 0.02 Orthogroups_2024-Update
At4g05050 No alias Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0] 0.01 Orthogroups_2024-Update
At5g03240 No alias Ubiquitin 4 [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGQ7] 0.02 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Bradi1g32700 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g32860 No alias polyubiquitin 10 0.01 Orthogroups_2024-Update
Bradi2g28050 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.01 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.02 Orthogroups_2024-Update
Bradi3g04730 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Bradi4g30470 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Brara.D00067.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.G00545.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Glyma.13G138600 No alias ubiquitin 4 0.02 Orthogroups_2024-Update
Glyma.15G259200 No alias related to ubiquitin 1 0.01 Orthogroups_2024-Update
HORVU1Hr1G043930.8 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
HORVU4Hr1G061900.2 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00325_0060 kfl00325_0060_v1.1 (at5g42220 : 100.0) Ubiquitin-like superfamily protein;... 0.04 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_13101g0020 No alias (at3g52590 : 257.0) Ubiquitin extension protein;... 0.02 Orthogroups_2024-Update
MA_371071g0010 No alias (at5g03240 : 517.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
MA_529552g0010 No alias (at3g62250 : 229.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
MA_53043g0010 No alias (at1g31340 : 234.0) Encodes a ubiquitin-related protein... 0.02 Orthogroups_2024-Update
MA_89348g0010 No alias (at5g03240 : 422.0) encodes ubiquitin that is attached... 0.01 Orthogroups_2024-Update
MA_9420337g0010 No alias (at5g03240 : 357.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.03 Orthogroups_2024-Update
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Pp1s127_93V6 No alias polyubiquitin 2 0.01 Orthogroups_2024-Update
Pp1s351_6V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.03 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.03 Orthogroups_2024-Update
Seita.1G078800.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.004G050000.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G040600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.010G210000.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Solyc03g082570 No alias ubiquitin-ribosomal fusion protein 0.01 Orthogroups_2024-Update
Solyc08g008590 No alias ubiquitin-ribosomal fusion protein 0.02 Orthogroups_2024-Update
evm.model.tig00000144.76 No alias (at2g35635 : 253.0) encodes a ubiquitin-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 3 74
No external refs found!