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  5. Cre09.g397200

Cre09.g397200


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG_42_0004744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre09.g397200
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
158120 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Bradi3g04130 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Brara.E03569.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.02 Orthogroups_2024-Update
Glyma.18G298100 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G091690.4 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Kfl00177_0050 kfl00177_0050_v1.1 (at3g02530 : 867.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update
MA_8438g0020 No alias (at3g02530 : 563.0) TCP-1/cpn60 chaperonin family... 0.05 Orthogroups_2024-Update
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.06 Orthogroups_2024-Update
PSME_00001475-RA No alias (at3g02530 : 757.0) TCP-1/cpn60 chaperonin family... 0.01 Orthogroups_2024-Update
Potri.017G113600 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Potri.T147600 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Pp1s138_31V6 No alias F16B3.16; chaperonin, putative [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G039600.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.05 Orthogroups_2024-Update
Sobic.002G423500.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Solyc02g063090 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.02 Orthogroups_2024-Update
Solyc02g085790 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.01 Orthogroups_2024-Update
Sopen02g014170 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen02g030480 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
evm.model.contig_827.1 No alias (at5g16070 : 650.0) TCP-1/cpn60 chaperonin family... 0.03 Orthogroups_2024-Update
evm.model.tig00000789.37 No alias (at3g02530 : 621.0) TCP-1/cpn60 chaperonin family... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 30 540
No external refs found!