1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g072590

Solyc09g072590


Description : Actin-depolymerizing factor (AHRD V3.3 *** ADF_VITVI)


Gene families : OG_42_0000295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g072590
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
At2g16700 No alias ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9] 0.04 Orthogroups_2024-Update
At2g31200 No alias Actin-depolymerizing factor 6... 0.03 Orthogroups_2024-Update
At4g34970 No alias Actin-depolymerizing factor 9... 0.03 Orthogroups_2024-Update
Brara.C01063.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
GRMZM2G117603 No alias actin depolymerizing factor 11 0.02 Orthogroups_2024-Update
Glyma.03G162900 No alias actin depolymerizing factor 6 0.05 Orthogroups_2024-Update
LOC_Os03g60580 No alias actin-depolymerizing factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_8419970g0010 No alias (q8sag3|adf_vitvi : 239.0) Actin-depolymerizing factor... 0.03 Orthogroups_2024-Update
Potri.005G223800 No alias actin depolymerizing factor 6 0.03 Orthogroups_2024-Update
Solyc06g035980 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 --*... 0.04 Orthogroups_2024-Update
Solyc10g017550 No alias Actin-depolymerizing factor (AHRD V3.3 *** ADF_LILLO) 0.03 Orthogroups_2024-Update
Sopen04g005560 No alias Cofilin/tropomyosin-type actin-binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002108 ADF-H 21 142
No external refs found!