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  5. Cre09.g400182

Cre09.g400182


Description : Function unknown


Gene families : OG_42_0000042 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre09.g400182
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre04.g229374 No alias Function unknown 0.06 Orthogroups_2024-Update
Cre20.g751397 No alias RNA binding;RNA-directed DNA polymerases 0.06 Orthogroups_2024-Update
LOC_Os04g04130 No alias retrotransposon protein, putative, unclassified 0.02 Orthogroups_2024-Update
LOC_Os07g23480 No alias retrotransposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os10g01900 No alias retrotransposon protein, putative, LINE subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g07410 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g37800 No alias retrotransposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
Sopen00g013500 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen05g031780 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen06g010230 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
Sopen06g013940 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen07g006490 No alias hypothetical protein 0.01 Orthogroups_2024-Update
evm.model.tig00000383.1 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000477 RT_dom 1629 1871
IPR005135 Endo/exonuclease/phosphatase 1069 1296
No external refs found!