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  5. Solyc09g072930

Solyc09g072930


Description : LOW QUALITY:F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A103XHT5_CYNCS)


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g072930
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
A4A49_14296 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
Glyma.02G188000 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
LOC_Os10g41829 No alias OsFBX393 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G224300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.001G318300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.002G223000 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.006G010800 No alias F-box associated ubiquitination effector family protein 0.03 Orthogroups_2024-Update
Potri.012G014300 No alias F-box family protein 0.04 Orthogroups_2024-Update
Potri.016G012700 No alias F-box and associated interaction domains-containing protein 0.05 Orthogroups_2024-Update
Sopen10g004400 No alias F-box domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 49
No external refs found!