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Description : tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (AHRD V3.3 *** AT1G51310.1)
Gene families : OG_42_0005805 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005805_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc09g074100 | |
| Cluster | HCCA clusters: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Kfl00364_0040 | kfl00364_0040_v1.1 | (at1g51310 : 465.0) transferases;tRNA... | 0.01 | Orthogroups_2024-Update | |
| Potri.001G259000 | No alias | transferases;tRNA... | 0.05 | Orthogroups_2024-Update | |
| Seita.9G521300.1 | No alias | tRNA thiouridylase | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
| MF | GO:0004615 | phosphomannomutase activity | IEP | Predicted GO |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Predicted GO |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Predicted GO |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Predicted GO |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
| BP | GO:0015743 | malate transport | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0016987 | sigma factor activity | IEP | Predicted GO |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |