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  5. Cre10.g424350

Cre10.g424350


Description : DA1


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre10.g424350
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
143378 No alias LIM domain-containing protein 0.02 Orthogroups_2024-Update
Brara.I00896.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
Glyma.02G059900 No alias LIM domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.18G034100 No alias DA1-related protein 2 0.02 Orthogroups_2024-Update
Kfl00898_0030 kfl00898_0030_v1.... (at4g36860 : 358.0) LIM domain-containing protein;... 0.03 Orthogroups_2024-Update
Potri.002G132700 No alias DA1 0.01 Orthogroups_2024-Update
Seita.9G459200.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
Sobic.008G152600.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 370 423
IPR022087 DA1-like 548 734
No external refs found!