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  5. Cre10.g429050

Cre10.g429050


Description : 5\'-3\' exonuclease family protein


Gene families : OG_42_0008357 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre10.g429050
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_03752 No alias dna repair protein uvh3 0.01 Orthogroups_2024-Update
At3g28030 No alias 5'-3' exonuclease family protein... 0.02 Orthogroups_2024-Update
Bradi1g70850 No alias 5\'-3\' exonuclease family protein 0.03 Orthogroups_2024-Update
Glyma.01G077200 No alias 5\'-3\' exonuclease family protein 0.04 Orthogroups_2024-Update
Potri.017G070500 No alias 5\'-3\' exonuclease family protein 0.03 Orthogroups_2024-Update
Sobic.001G464200.1 No alias DNA repair endonuclease *(XPG) 0.02 Orthogroups_2024-Update
evm.model.tig00020544.9 No alias (at3g28030 : 241.0) Required for repair of... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
InterPro domains Description Start Stop
IPR006085 XPG_DNA_repair_N 1 96
IPR006086 XPG-I_dom 1995 2078
No external refs found!