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Description : chloroplast RNA binding
Gene families : OG_42_0003865 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003865_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Chlamydomonas release: Cre10.g435800 | |
| Cluster | HCCA clusters: Cluster_156 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| HORVU2Hr1G029230.1 | No alias | endoribonuclease *(CSP41) | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G036220.1 | No alias | endoribonuclease *(CSP41) | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G053340.3 | No alias | endoribonuclease *(CSP41) | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G052270.4 | No alias | endoribonuclease *(CSP41) | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G009200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G066100.1 | No alias | endoribonuclease *(CSP41) | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00021720.14 | No alias | (at1g09340 : 242.0) Encodes CHLOROPLAST RNA BINDING... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | InterProScan predictions |
| MF | GO:0050662 | coenzyme binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001509 | Epimerase_deHydtase | 61 | 279 |
| No external refs found! |