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  5. Cre10.g439100

Cre10.g439100


Description : T-complex protein 1 alpha subunit


Gene families : OG_42_0004155 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre10.g439100
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Bradi1g49760 No alias T-complex protein 1 alpha subunit 0.01 Orthogroups_2024-Update
Bradi5g17750 No alias T-complex protein 1 alpha subunit 0.04 Orthogroups_2024-Update
Brara.A02836.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.02 Orthogroups_2024-Update
Brara.C03770.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.02 Orthogroups_2024-Update
Brara.E02197.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.03 Orthogroups_2024-Update
Glyma.08G123100 No alias T-complex protein 1 alpha subunit 0.02 Orthogroups_2024-Update
HORVU7Hr1G044070.2 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.03 Orthogroups_2024-Update
Kfl00006_0550 kfl00006_0550_v1.1 (at3g20050 : 798.0) Encodes a putative cytoplasmic... 0.01 Orthogroups_2024-Update
MA_21256g0010 No alias (at3g20050 : 567.0) Encodes a putative cytoplasmic... 0.04 Orthogroups_2024-Update
Mp7g01530.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.07 Orthogroups_2024-Update
PSME_00016793-RA No alias (at3g20050 : 487.0) Encodes a putative cytoplasmic... 0.03 Orthogroups_2024-Update
PSME_00016794-RA No alias (at3g20050 : 328.0) Encodes a putative cytoplasmic... 0.01 Orthogroups_2024-Update
Pp1s39_248V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s97_11V6 No alias MAL21.5; T-complex protein 1 alpha subunit / TCP-1-alpha... 0.03 Orthogroups_2024-Update
Seita.4G052500.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.05 Orthogroups_2024-Update
Seita.7G190300.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.02 Orthogroups_2024-Update
Sobic.004G326600.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.04 Orthogroups_2024-Update
Solyc01g090750 No alias T-complex protein 1 alpha subunit (AHRD V3.3 *** AT3G20050.1) 0.02 Orthogroups_2024-Update
evm.model.contig_3552.5 No alias (at3g20050 : 578.0) Encodes a putative cytoplasmic... 0.01 Orthogroups_2024-Update
evm.model.tig00021350.16 No alias (at3g20050 : 727.0) Encodes a putative cytoplasmic... 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 33 541
No external refs found!