1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g074630

Solyc09g074630


Description : Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT1G03010.2)


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g074630
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Bradi1g13890 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.20G180400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G069760.10 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G032660.3 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_7675g0010 No alias (at5g48800 : 618.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00048851-RA No alias (at1g30440 : 630.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.001G357100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.005G130700 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.007G033900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Sopen01g048130 No alias NPH3 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 181 449
No external refs found!