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  5. Solyc09g074780

Solyc09g074780


Description : Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU)


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g074780
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
GRMZM2G141031 No alias indeterminate(ID)-domain 16 0.03 Orthogroups_2024-Update
Glyma.07G009100 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
LOC_Os01g70870 No alias ZOS1-23 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
Potri.008G142500 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Seita.5G137700.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G417500.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 76 98
No external refs found!