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  5. Cre10.g453450

Cre10.g453450


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_42_0003055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre10.g453450
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G166985 No alias Small nuclear ribonucleoprotein family protein 0.02 Orthogroups_2024-Update
Kfl00067_0020 kfl00067_0020_v1.1 (at3g62840 : 167.0) Small nuclear ribonucleoprotein... 0.03 Orthogroups_2024-Update
PSME_00013696-RA No alias (at3g62840 : 192.0) Small nuclear ribonucleoprotein... 0.02 Orthogroups_2024-Update
Potri.014G129100 No alias Small nuclear ribonucleoprotein family protein 0.01 Orthogroups_2024-Update
Seita.3G065200.1 No alias component *(Sm-D2) of U1/U2/U4/U5-associated Sm... 0.02 Orthogroups_2024-Update
Solyc09g075130 No alias Small nuclear ribonucleoprotein family protein (AHRD... 0.02 Orthogroups_2024-Update
evm.model.tig00021133.4 No alias (at3g62840 : 152.0) Small nuclear ribonucleoprotein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 34 105
No external refs found!