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  5. Solyc09g074890

Solyc09g074890


Description : Rapid alkalinization factor (AHRD V3.3 *** RALF_TOBAC)


Gene families : OG_42_0000460 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g074890
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_10920 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At3g05490 No alias RALFL22 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ8] 0.03 Orthogroups_2024-Update
Bradi2g09300 No alias rapid alkalinization factor 1 0.03 Orthogroups_2024-Update
Bradi4g19480 No alias ralf-like 33 0.03 Orthogroups_2024-Update
LOC_Os04g54090 No alias RALFL18 - Rapid ALkalinization Factor RALF family... 0.02 Orthogroups_2024-Update
MA_1059g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sobic.003G160700.1 No alias RALF/RALFL precursor polypeptide 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008801 RALF 57 117
No external refs found!