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  5. Solyc09g075030

Solyc09g075030


Description : Nucleolar 16 (AHRD V3.3 *** A0A0B0MNY1_GOSAR)


Gene families : OG_42_0006033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006033_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc09g075030
Cluster HCCA clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Brara.J00137.1 No alias pre-60S ribosomal subunit assembly factor *(NOP16) 0.04 Orthogroups_2024-Update
PSME_00020959-RA No alias (at1g02870 : 208.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
Seita.3G269900.1 No alias pre-60S ribosomal subunit assembly factor *(NOP16) 0.03 Orthogroups_2024-Update
Sopen09g029850 No alias Ribosome biogenesis protein Nop16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 96 183
IPR019002 Ribosome_biogenesis_Nop16 5 76
No external refs found!