Description : Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC)
Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc09g075430 | |
Cluster | HCCA clusters: Cluster_55 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
271656 | No alias | Ribosomal protein L19e family protein | 0.07 | Orthogroups_2024-Update | |
A4A49_20584 | No alias | 60s ribosomal protein l19-2 | 0.03 | Orthogroups_2024-Update | |
A4A49_58465 | No alias | 60s ribosomal protein l19-2 | 0.08 | Orthogroups_2024-Update | |
At3g16780 | No alias | 60S ribosomal protein L19-2... | 0.04 | Orthogroups_2024-Update | |
Bradi1g17920 | No alias | Ribosomal protein L19e family protein | 0.09 | Orthogroups_2024-Update | |
Bradi1g63010 | No alias | Ribosomal protein L19e family protein | 0.1 | Orthogroups_2024-Update | |
Brara.H03109.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.I00133.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.I05560.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.18 | Orthogroups_2024-Update | |
Brara.J00128.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Cre02.g075700 | No alias | Ribosomal protein L19e family protein | 0.14 | Orthogroups_2024-Update | |
GRMZM2G116135 | No alias | Ribosomal protein L19e family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.02G016000 | No alias | Ribosomal protein L19e family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.03G211000 | No alias | Ribosomal protein L19e family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.03G216600 | No alias | Ribosomal protein L19e family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G016400 | No alias | Ribosomal protein L19e family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G208200 | No alias | Ribosomal protein L19e family protein | 0.05 | Orthogroups_2024-Update | |
HORVU2Hr1G018700.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G049670.2 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Kfl00915_0030 | kfl00915_0030_v1.1 | (at1g02780 : 290.0) embryo defective 2386 (emb2386);... | 0.04 | Orthogroups_2024-Update | |
MA_1839g0010 | No alias | (at1g02780 : 287.0) embryo defective 2386 (emb2386);... | 0.06 | Orthogroups_2024-Update | |
MA_22977g0010 | No alias | (at1g02780 : 282.0) embryo defective 2386 (emb2386);... | 0.06 | Orthogroups_2024-Update | |
Mp7g09050.1 | No alias | component RPL19 of LSU proteome component | 0.11 | Orthogroups_2024-Update | |
PSME_00044681-RA | No alias | (at3g16780 : 285.0) Ribosomal protein L19e family... | 0.04 | Orthogroups_2024-Update | |
Potri.012G037500 | No alias | Ribosomal protein L19e family protein | 0.05 | Orthogroups_2024-Update | |
Pp1s121_144V6 | No alias | 60s ribosomal protein | 0.15 | Orthogroups_2024-Update | |
Pp1s144_37V6 | No alias | ribosomal protein l19 | 0.13 | Orthogroups_2024-Update | |
Pp1s235_118V6 | No alias | 60s ribosomal protein | 0.12 | Orthogroups_2024-Update | |
Pp1s302_25V6 | No alias | ribosomal protein l19 | 0.03 | Orthogroups_2024-Update | |
Pp1s3_375V6 | No alias | 60s ribosomal protein l19-3 | 0.14 | Orthogroups_2024-Update | |
Pp1s50_102V6 | No alias | 60s ribosomal protein l19-3 | 0.11 | Orthogroups_2024-Update | |
Pp1s83_173V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s83_174V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Seita.4G043900.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Sobic.003G196800.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.004G045300.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.15 | Orthogroups_2024-Update | |
Sobic.010G069400.1 | No alias | component *(eL19) of large ribosomal-subunit (LSU) proteome | 0.16 | Orthogroups_2024-Update | |
Sopen06g003980 | No alias | Ribosomal protein L19e | 0.1 | Orthogroups_2024-Update | |
Sopen09g030210 | No alias | Ribosomal protein L19e | 0.09 | Orthogroups_2024-Update | |
evm.model.contig_735.3 | No alias | (at3g16780 : 205.0) Ribosomal protein L19e family... | 0.08 | Orthogroups_2024-Update | |
evm.model.tig00021181.1 | No alias | (at1g02780 : 206.0) embryo defective 2386 (emb2386);... | 0.13 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0007005 | mitochondrion organization | IEP | Predicted GO |
BP | GO:0007006 | mitochondrial membrane organization | IEP | Predicted GO |
BP | GO:0007008 | outer mitochondrial membrane organization | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
BP | GO:0045040 | protein import into mitochondrial outer membrane | IEP | Predicted GO |
BP | GO:0061024 | membrane organization | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0090151 | establishment of protein localization to mitochondrial membrane | IEP | Predicted GO |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000196 | Ribosomal_L19/L19e | 4 | 146 |
No external refs found! |