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  5. Cre11.g468050

Cre11.g468050


Description : plastid transcriptionally active 4


Gene families : OG_42_0004278 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre11.g468050
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18320 No alias plastid transcriptionally active 4 0.01 Orthogroups_2024-Update
Bradi2g56880 No alias plastid transcriptionally active 4 0.02 Orthogroups_2024-Update
Kfl00632_0090 kfl00632_0090_v1.1 (q03943|im30_pea : 219.0) Membrane-associated 30 kDa... 0.01 Orthogroups_2024-Update
Pp1s22_267V6 No alias contains ESTs AU056345(S20491),AU056346(S20491) [Oryza... 0.01 Orthogroups_2024-Update
Pp1s322_14V6 No alias pspa im30 family protein 0.01 Orthogroups_2024-Update
evm.model.contig_3575.2 No alias (q03943|im30_pea : 158.0) Membrane-associated 30 kDa... 0.02 Orthogroups_2024-Update
evm.model.contig_4431.1 No alias (q03943|im30_pea : 201.0) Membrane-associated 30 kDa... 0.01 Orthogroups_2024-Update
evm.model.tig00020816.44 No alias (q8s0j7|im30_orysa : 191.0) Probable membrane-associated... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007157 PspA_IM30 125 342
No external refs found!