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Description : Protein COBRA, putative (AHRD V3.3 *** B9RZK6_RICCO)
Gene families : OG_42_0001403 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc09g075540 | |
| Cluster | HCCA clusters: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 126731 | No alias | COBRA-like protein-7 precursor | 0.03 | Orthogroups_2024-Update | |
| A4A49_42439 | No alias | cobra-like protein 10 | 0.03 | Orthogroups_2024-Update | |
| At3g20580 | No alias | COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0] | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G056627 | No alias | COBRA-like protein 10 precursor | 0.04 | Orthogroups_2024-Update | |
| Glyma.01G240232 | No alias | COBRA-like protein 10 precursor | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G028350.1 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | Orthogroups_2024-Update | |
| MA_10426946g0030 | No alias | (at3g20580 : 555.0) COBRA-like protein 10 precursor... | 0.02 | Orthogroups_2024-Update | |
| Potri.010G001100 | No alias | COBRA-like protein-7 precursor | 0.02 | Orthogroups_2024-Update | |
| Pp1s195_50V6 | No alias | FCAALL.104; phytochelatin synthetase-related... | 0.03 | Orthogroups_2024-Update | |
| Pp1s263_89V6 | No alias | COBRA-like protein 7 precursor [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G399900.1 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G323200.1 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g006450 | No alias | COBRA-like protein (AHRD V3.3 *** L0AUC5_POPTO) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010215 | cellulose microfibril organization | IEA | InterProScan predictions |
| BP | GO:0016043 | cellular component organization | None | Extended |
| BP | GO:0016049 | cell growth | IEA | InterProScan predictions |
| BP | GO:0030198 | extracellular matrix organization | None | Extended |
| CC | GO:0031224 | intrinsic component of membrane | None | Extended |
| CC | GO:0031225 | anchored component of membrane | IEA | InterProScan predictions |
| BP | GO:0040007 | growth | None | Extended |
| BP | GO:0043062 | extracellular structure organization | None | Extended |
| CC | GO:0044425 | membrane part | None | Extended |
| BP | GO:0071840 | cellular component organization or biogenesis | None | Extended |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0050661 | NADP binding | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 221 | 400 |
| No external refs found! |
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