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  5. Cre12.g505550

Cre12.g505550


Description : histone H2A 10


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre12.g505550
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
170948 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Glyma.03G148100 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Glyma.15G040400 No alias histone H2A 12 0.02 Orthogroups_2024-Update
HORVU6Hr1G006140.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
HORVU6Hr1G021260.2 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
MA_10426943g0010 No alias (p50567|h2a_chlre : 132.0) Histone H2A - Chlamydomonas... 0.02 Orthogroups_2024-Update
PSME_00008207-RA No alias (p02276|h2a2_wheat : 135.0) Histone H2A.2.1 - Triticum... 0.02 Orthogroups_2024-Update
PSME_00008212-RA No alias (p50567|h2a_chlre : 107.0) Histone H2A - Chlamydomonas... 0.02 Orthogroups_2024-Update
PSME_00015855-RA No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.02 Orthogroups_2024-Update
PSME_00040346-RA No alias (p50567|h2a_chlre : 144.0) Histone H2A - Chlamydomonas... 0.02 Orthogroups_2024-Update
Pp1s72_86V6 No alias histone h2a 0.02 Orthogroups_2024-Update
Seita.5G370700.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sobic.001G416800.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sobic.001G416900.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sobic.002G330000.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sopen01g042970 No alias Core histone H2A/H2B/H3/H4 0.01 Orthogroups_2024-Update
Sopen09g031570 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen10g002510 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 9 88
IPR032454 Histone_H2A_C 91 124
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