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  5. Cre12.g506250

Cre12.g506250


Description : histone H2A 10


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre12.g506250
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
170948 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_29055 No alias putative histone h2a.4 0.01 Orthogroups_2024-Update
A4A49_30810 No alias histone h2ax 0.02 Orthogroups_2024-Update
At3g20670 No alias Probable histone H2A.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHQ5] 0.02 Orthogroups_2024-Update
Bradi1g25390 No alias histone H2A 10 0.01 Orthogroups_2024-Update
Brara.A02813.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
Brara.B01060.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
Brara.C01065.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.E02150.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
Brara.F02852.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
Brara.J01356.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
Cre06.g265350 No alias histone H2A 10 0.03 Orthogroups_2024-Update
Cre06.g268300 No alias histone H2A 10 0.04 Orthogroups_2024-Update
Cre13.g570100 No alias histone H2A 10 0.05 Orthogroups_2024-Update
Cre17.g711700 No alias histone H2A 10 0.03 Orthogroups_2024-Update
GRMZM2G041381 No alias histone H2A 2 0.01 Orthogroups_2024-Update
GRMZM2G109448 No alias histone H2A 12 0.02 Orthogroups_2024-Update
GRMZM2G151726 No alias histone H2A 2 0.01 Orthogroups_2024-Update
GRMZM2G151826 No alias histone H2A 2 0.01 Orthogroups_2024-Update
Glyma.03G148100 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G241800 No alias gamma histone variant H2AX 0.01 Orthogroups_2024-Update
Glyma.13G286000 No alias histone H2A 10 0.01 Orthogroups_2024-Update
Glyma.13G333800 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.13G333900 No alias histone H2A 12 0.03 Orthogroups_2024-Update
Glyma.13G334300 No alias histone H2A 12 0.01 Orthogroups_2024-Update
Glyma.15G040200 No alias histone H2A 12 0.01 Orthogroups_2024-Update
Glyma.15G040300 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.15G040400 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.19G151400 No alias gamma histone variant H2AX 0.02 Orthogroups_2024-Update
Glyma.19G234100 No alias histone H2A 7 0.02 Orthogroups_2024-Update
HORVU1Hr1G005870.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU2Hr1G043860.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G006140.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU6Hr1G021160.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU6Hr1G021260.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G092390.1 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
HORVU7Hr1G100100.3 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU7Hr1G100110.4 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
HORVU7Hr1G100120.13 No alias histone *(H2A) 0.01 Orthogroups_2024-Update
HORVU7Hr1G112470.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Kfl00099_g21 kfl00099_g21_v1.1 (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... 0.02 Orthogroups_2024-Update
LOC_Os03g17100 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.01 Orthogroups_2024-Update
MA_10426943g0010 No alias (p50567|h2a_chlre : 132.0) Histone H2A - Chlamydomonas... 0.03 Orthogroups_2024-Update
MA_191819g0010 No alias (at4g27230 : 166.0) Encodes HTA2, a histone H2A... 0.02 Orthogroups_2024-Update
MA_22203g0020 No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.01 Orthogroups_2024-Update
MA_7320190g0010 No alias (p19177|h2a_petcr : 149.0) Histone H2A - Petroselinum... 0.01 Orthogroups_2024-Update
PSME_00008207-RA No alias (p02276|h2a2_wheat : 135.0) Histone H2A.2.1 - Triticum... 0.04 Orthogroups_2024-Update
PSME_00008212-RA No alias (p50567|h2a_chlre : 107.0) Histone H2A - Chlamydomonas... 0.03 Orthogroups_2024-Update
PSME_00015855-RA No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.04 Orthogroups_2024-Update
PSME_00040346-RA No alias (p50567|h2a_chlre : 144.0) Histone H2A - Chlamydomonas... 0.02 Orthogroups_2024-Update
Pp1s72_86V6 No alias histone h2a 0.03 Orthogroups_2024-Update
Seita.5G370700.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Sobic.001G416800.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sobic.001G416900.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Sobic.002G330000.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Sopen01g042970 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen09g005140 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen09g029130 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen09g031570 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen10g002510 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030890 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 9 88
IPR032454 Histone_H2A_C 91 124
No external refs found!