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  5. Cre12.g517900

Cre12.g517900


Description : Albino or Glassy Yellow 1


Gene families : OG_42_0001932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre12.g517900
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
156007 No alias Albino or Glassy Yellow 1 0.02 Orthogroups_2024-Update
Bradi2g12067 No alias Albino or Glassy Yellow 1 0.04 Orthogroups_2024-Update
Glyma.10G137800 No alias Albino or Glassy Yellow 1 0.01 Orthogroups_2024-Update
LOC_Os01g21820 No alias preprotein translocase subunit secA, chloroplast... 0.01 Orthogroups_2024-Update
MA_491265g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_9251669g0020 No alias (q41062|seca_pea : 165.0) Preprotein translocase secA... 0.02 Orthogroups_2024-Update
Mp5g09750.1 No alias component SecA1 of thylakoid membrane Sec1 translocation system 0.01 Orthogroups_2024-Update
PSME_00006301-RA No alias (q41062|seca_pea : 399.0) Preprotein translocase secA... 0.02 Orthogroups_2024-Update
PSME_00009281-RA No alias (q41062|seca_pea : 517.0) Preprotein translocase secA... 0.03 Orthogroups_2024-Update
PSME_00018632-RA No alias (q41062|seca_pea : 339.0) Preprotein translocase secA... 0.02 Orthogroups_2024-Update
Sobic.003G150800.1 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 Orthogroups_2024-Update
Solyc01g080840 No alias Protein translocase subunit SecA (AHRD V3.3 *** K4AXX7_SOLLC) 0.01 Orthogroups_2024-Update
Solyc11g005020 No alias Protein translocase subunit SecA (AHRD V3.3 *** K4D4B5_SOLLC) 0.01 Orthogroups_2024-Update
evm.model.tig00000219.51 No alias (at4g01800 : 515.0) Encodes the ATPase subunit of the... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0017038 protein import IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011116 SecA_Wing/Scaffold 761 977
IPR011130 SecA_preprotein_X-link_dom 301 407
IPR011115 SecA_DEAD 78 450
No external refs found!