Solyc01g094360


Description : MYB-related transcription factor (AHRD V3.3 *** A0A059PRS4_SALMI)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g094360
Cluster HCCA clusters: Cluster_255

GRMZM2G162709
Target Alias Description ECC score Gene Family Method Actions
At3g13890 No alias Transcription factor MYB26... 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Bradi5g20051 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Brara.E03613.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.01G211500 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.05 Orthogroups_2024-Update
Glyma.10G191000 No alias myb domain protein 305 0.04 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G038100 No alias myb domain protein 57 0.03 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.03 Orthogroups_2024-Update
Glyma.20G090700 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
HORVU5Hr1G022690.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
Kfl00279_0100 kfl00279_0100_v1.... (at1g18570 : 127.0) Encodes a member of the R2R3-MYB... 0.02 Orthogroups_2024-Update
LOC_Os01g09590 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g49310 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00019108-RA No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.005G074500 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.011G125900 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Potri.012G055600 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.014G081200 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.05 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.03 Orthogroups_2024-Update
Potri.019G018200 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Pp1s2_60V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.02 Orthogroups_2024-Update
Sobic.003G331100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Solyc12g099130 No alias R2R3MYB transcription factor 108 0.03 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen07g003890 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g025260 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!