Cre12.g535851


Description : Ribosomal protein L2 family


Gene families : OG_42_0001760 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre12.g535851
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
170971 No alias Ribosomal protein L2 family 0.12 Orthogroups_2024-Update
A4A49_56239 No alias 60s ribosomal protein l8 0.06 Orthogroups_2024-Update
At2g18020 No alias EMB2296 [Source:UniProtKB/TrEMBL;Acc:A0A178VSS0] 0.02 Orthogroups_2024-Update
Bradi4g04120 No alias Ribosomal protein L2 family 0.09 Orthogroups_2024-Update
Brara.A00238.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.G00216.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Brara.H01666.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.K01326.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Glyma.01G167300 No alias Ribosomal protein L2 family 0.1 Orthogroups_2024-Update
Glyma.02G049300 No alias Ribosomal protein L2 family 0.12 Orthogroups_2024-Update
Glyma.11G076000 No alias Ribosomal protein L2 family 0.04 Orthogroups_2024-Update
Glyma.16G129700 No alias Ribosomal protein L2 family 0.08 Orthogroups_2024-Update
HORVU5Hr1G021730.2 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Kfl00779_0020 kfl00779_0020_v1.1 (at4g36130 : 456.0) Ribosomal protein L2 family;... 0.03 Orthogroups_2024-Update
Mp7g01860.1 No alias component RPL8 of LSU proteome component 0.11 Orthogroups_2024-Update
Mp7g08730.1 No alias component RPL8 of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00025506-RA No alias (at4g36130 : 481.0) Ribosomal protein L2 family;... 0.02 Orthogroups_2024-Update
Pp1s37_247V6 No alias 60s ribosomal protein l2 0.09 Orthogroups_2024-Update
Seita.2G112000.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Seita.3G330100.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Sobic.002G115000.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.008G135000.1 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Solyc07g063890 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g006580 No alias ribosomal protein L2 0.04 Orthogroups_2024-Update
Solyc12g005330 No alias Ribosomal protein L2 family (AHRD V3.3 *** AT4G36130.1) 0.19 Orthogroups_2024-Update
Sopen07g032020 No alias Ribosomal Proteins L2, C-terminal domain 0.19 Orthogroups_2024-Update
Sopen10g002530 No alias Ribosomal Proteins L2, C-terminal domain 0.12 Orthogroups_2024-Update
Sopen12g001310 No alias Ribosomal Proteins L2, C-terminal domain 0.1 Orthogroups_2024-Update
evm.model.contig_2057.10 No alias (at4g36130 : 380.0) Ribosomal protein L2 family;... 0.21 Orthogroups_2024-Update
evm.model.tig00020965.22 No alias (at2g18020 : 400.0) embryo defective 2296 (EMB2296);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 126 257
IPR022666 Rbsml_prot_L2_RNA-bd_dom 39 118
No external refs found!