Cre13.g565850

Description : Coatomer, alpha subunit

Gene families : OG_42_0002646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Chlamydomonas release: Cre13.g565850
Cluster	HCCA clusters: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
77651	No alias	Coatomer, alpha subunit	0.02	Orthogroups_2024-Update
85610	No alias	Coatomer, alpha subunit	0.02	Orthogroups_2024-Update
A4A49_06969	No alias	coatomer subunit alpha-1	0.02	Orthogroups_2024-Update
At2g21390	No alias	Coatomer subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT9]	0.01	Orthogroups_2024-Update
Bradi1g78470	No alias	Coatomer, alpha subunit	0.08	Orthogroups_2024-Update
Bradi2g55640	No alias	Coatomer, alpha subunit	0.08	Orthogroups_2024-Update
Brara.H01794.1	No alias	subunit alpha of coat protein complex	0.02	Orthogroups_2024-Update
Glyma.04G255100	No alias	Coatomer, alpha subunit	0.01	Orthogroups_2024-Update
Glyma.10G199300	No alias	Coatomer, alpha subunit	0.04	Orthogroups_2024-Update
Glyma.11G113000	No alias	Coatomer, alpha subunit	0.03	Orthogroups_2024-Update
Glyma.12G038900	No alias	Coatomer, alpha subunit	0.04	Orthogroups_2024-Update
Glyma.20G190900	No alias	Coatomer, alpha subunit	0.03	Orthogroups_2024-Update
HORVU4Hr1G007520.2	No alias	subunit alpha of coat protein complex	0.01	Orthogroups_2024-Update
HORVU4Hr1G088390.1	No alias	subunit alpha of coat protein complex	0.02	Orthogroups_2024-Update
Kfl00045_0430	kfl00045_0430_v1.1	(at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS...	0.04	Orthogroups_2024-Update
MA_10429054g0030	No alias	(at1g62020 : 661.0) Coatomer, alpha subunit; FUNCTIONS...	0.01	Orthogroups_2024-Update
Mp3g00050.1	No alias	subunit alpha of coat protein complex	0.02	Orthogroups_2024-Update
PSME_00024193-RA	No alias	(at1g62020 : 1949.0) Coatomer, alpha subunit; FUNCTIONS...	0.01	Orthogroups_2024-Update
PSME_00051512-RA	No alias	(at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS...	0.02	Orthogroups_2024-Update
Potri.012G074800	No alias	Coatomer, alpha subunit	0.02	Orthogroups_2024-Update
Pp1s135_34V6	No alias	coatomer alpha	0.06	Orthogroups_2024-Update
Pp1s86_189V6	No alias	coatomer alpha	0.03	Orthogroups_2024-Update
Seita.5G140600.1	No alias	subunit alpha of coat protein complex	0.05	Orthogroups_2024-Update
Seita.9G119500.1	No alias	subunit alpha of coat protein complex	0.07	Orthogroups_2024-Update
Sobic.001G117800.1	No alias	subunit alpha of coat protein complex	0.05	Orthogroups_2024-Update
Sobic.003G029600.1	No alias	subunit alpha of coat protein complex	0.07	Orthogroups_2024-Update
Solyc07g032100	No alias	Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC)	0.02	Orthogroups_2024-Update
Sopen04g034590	No alias	Coatomer (COPI) alpha subunit C-terminus	0.02	Orthogroups_2024-Update
Sopen07g015440	No alias	Coatomer (COPI) alpha subunit C-terminus	0.02	Orthogroups_2024-Update
evm.model.contig_3512.2	No alias	(at1g62020 : 1115.0) Coatomer, alpha subunit; FUNCTIONS...	0.03	Orthogroups_2024-Update
evm.model.tig00000144.152	No alias	(at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
CC	GO:0030117	membrane coat	IEA	InterProScan predictions
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044431	Golgi apparatus part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Predicted GO
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
CC	GO:0005801	cis-Golgi network	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
BP	GO:0006487	protein N-linked glycosylation	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
BP	GO:0018196	peptidyl-asparagine modification	IEP	Predicted GO
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
BP	GO:0022406	membrane docking	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
BP	GO:0048278	vesicle docking	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO
BP	GO:0051640	organelle localization	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO
MF	GO:0070569	uridylyltransferase activity	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
BP	GO:0140029	exocytic process	IEP	Predicted GO
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predicted GO
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	126	163
IPR001680	WD40_repeat	45	79
IPR001680	WD40_repeat	242	277
IPR001680	WD40_repeat	84	121
IPR001680	WD40_repeat	199	232
IPR010714	Coatomer_asu_C	848	1242
IPR006692	Coatomer_WD-assoc_reg	341	769

External Links

No external refs found!

Cre13.g565850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation