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  5. Cre13.g566050

Cre13.g566050


Description : probable small nuclear ribonucleoprotein G


Gene families : OG_42_0003700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre13.g566050
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g29740 No alias LSM domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_91807g0010 No alias (at2g23930 : 139.0) probable small nuclear... 0.02 Orthogroups_2024-Update
PSME_00050600-RA No alias (at2g23930 : 102.0) probable small nuclear... 0.05 Orthogroups_2024-Update
Pp1s475_6V6 No alias small nuclear ribonucleoprotein g 0.02 Orthogroups_2024-Update
Seita.2G385800.1 No alias component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory... 0.02 Orthogroups_2024-Update
evm.model.tig00020553.48 No alias (at2g23930 : 97.4) probable small nuclear... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 8 68
No external refs found!