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  5. Solyc09g089660

Solyc09g089660


Description : Actin-related protein (AHRD V3.3 *** A0A103XII1_CYNCS)


Gene families : OG_42_0007090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g089660
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Pp1s25_151V6 No alias actin-related protein 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0000922 spindle pole IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007020 microtubule nucleation IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 19 556
No external refs found!