Solyc09g091670

Description : Pleiotropic drug resistance ABC transporter (AHRD V3.3 *** W0TUG3_ACAMN)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc09g091670
Cluster	HCCA clusters: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
235359	No alias	pleiotropic drug resistance 6	0.04	Orthogroups_2024-Update
426328	No alias	pleiotropic drug resistance 6	0.03	Orthogroups_2024-Update
441717	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
A4A49_23886	No alias	pleiotropic drug resistance protein 1	0.03	Orthogroups_2024-Update
Brara.F01034.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Cre16.g655450	No alias	pleiotropic drug resistance 3	0.02	Orthogroups_2024-Update
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.13G361900	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.20G187400	No alias	pleiotropic drug resistance 11	0.04	Orthogroups_2024-Update
HORVU3Hr1G022800.1	No alias	cuticular lipid exporter *(PEC1) & subfamily ABCG transporter	0.03	Orthogroups_2024-Update
HORVU3Hr1G053350.8	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
HORVU3Hr1G071470.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Kfl00855_0010	kfl00855_0010_v1.1	(q8gu89\|pdr4_orysa : 1415.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
LOC_Os01g08260	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g21340	No alias	ABC-2 type transporter family protein, expressed	0.03	Orthogroups_2024-Update
MA_3894g0010	No alias	(q76cu2\|pdr1_tobac : 501.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
PSME_00000869-RA	No alias	(q5z9s8\|pdr12_orysa : 1879.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00001762-RA	No alias	(q5z9s8\|pdr12_orysa : 1873.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00008988-RA	No alias	(q5z9s8\|pdr12_orysa : 1221.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00009192-RA	No alias	(q8gu88\|pdr7_orysa : 1875.0) Putative pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00013320-RA	No alias	(q8gu88\|pdr7_orysa : 1886.0) Putative pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00014724-RA	No alias	(q76cu2\|pdr1_tobac : 1860.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00015395-RA	No alias	(q76cu2\|pdr1_tobac : 1904.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
Potri.001G175700	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Potri.003G179000	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Seita.2G335300.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G302300.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.9G187800.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G215600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G215800.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.010G165500.3	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Solyc12g100180	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.06	Orthogroups_2024-Update
Sopen05g032120	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update
Sopen11g003180	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
MF	GO:0004312	fatty acid synthase activity	IEP	Predicted GO
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	173	355
IPR003439	ABC_transporter-like	860	1012
IPR013581	PDR_assoc	726	789
IPR013525	ABC_2_trans	1158	1371
IPR013525	ABC_2_trans	509	721
IPR029481	ABC_trans_N	91	148

External Links

No external refs found!

Solyc09g091670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation