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  5. Solyc09g091730

Solyc09g091730


Description : Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC)


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g091730
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_32955 No alias putative pectinesterase 53 0.02 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g44600 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g46190 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_304854g0010 No alias (at2g21610 : 347.0) pectinesterase 11 (PE11); FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp2g19430.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc01g079180 No alias Pectinesterase (AHRD V3.3 *** K4AXG4_SOLLC) 0.03 Orthogroups_2024-Update
Solyc12g098340 No alias Pectinesterase (AHRD V3.3 *** K4DHK8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g030950 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 42 330
No external refs found!