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  5. Cre16.g679900

Cre16.g679900


Description : 5\'-3\' exoribonuclease 3


Gene families : OG_42_0000619 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre16.g679900
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05660 No alias exoribonuclease 4 0.02 Orthogroups_2024-Update
GRMZM2G099630 No alias exoribonuclease 4 0.02 Orthogroups_2024-Update
Glyma.14G218000 No alias 5\'-3\' exoribonuclease 3 0.02 Orthogroups_2024-Update
Glyma.17G257100 No alias 5\'-3\' exoribonuclease 3 0.02 Orthogroups_2024-Update
Glyma.19G242400 No alias exoribonuclease 4 0.02 Orthogroups_2024-Update
Seita.6G040000.1 No alias exoribonuclease *(RAT1/XRN2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004527 exonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004859 Put_53exo 1 253
No external refs found!