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  5. Solyc09g092250

Solyc09g092250


Description : Zinc finger transcription factor 55


Gene families : OG_42_0005890 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g092250
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G109600 No alias RNA recognition motif (RRM)-containing protein 0.03 Orthogroups_2024-Update
Sopen09g035180 No alias Filamin/ABP280 repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0030904 retromer complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 347 407
IPR017868 Filamin/ABP280_repeat-like 83 180
No external refs found!