1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g094760

Solyc01g094760


Description : Origin recognition complex subunit 5 (AHRD V3.3 *** W9QP90_9ROSA)


Gene families : OG_42_0005885 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g094760
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cre07.g355200 No alias origin recognition complex protein 5 0.05 Orthogroups_2024-Update
Kfl00165_0140 kfl00165_0140_v1.1 (at4g29910 : 184.0) Origin Recognition Complex subunit... 0.05 Orthogroups_2024-Update
MA_10436793g0010 No alias (at4g29910 : 345.0) Origin Recognition Complex subunit... 0.04 Orthogroups_2024-Update
PSME_00036655-RA No alias (at4g29910 : 391.0) Origin Recognition Complex subunit... 0.03 Orthogroups_2024-Update
Pp1s98_20V6 No alias origin recognition subunit 5-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006260 DNA replication IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046080 dUTP metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR020796 ORC5 250 535
No external refs found!