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Description : Long-chain acyl-CoA synthetase (AHRD V3.3 *** A0A061R0V4_9CHLO)
Gene families : OG_42_0004318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004318_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc09g092450 | |
| Cluster | HCCA clusters: Cluster_113 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp1s222_97V6 | No alias | amp-dependent synthetase and ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.9G013500.1 | No alias | medium-chain acyl-ACP synthetase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | InterProScan predictions |
| BP | GO:0008152 | metabolic process | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003774 | motor activity | IEP | Predicted GO |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Predicted GO |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| CC | GO:0009317 | acetyl-CoA carboxylase complex | IEP | Predicted GO |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig | 88 | 596 |
| No external refs found! |