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  5. MA_100402g0010

MA_100402g0010


Description : (at4g02890 : 582.0) Polyubiquitin gene containing 4 ubiquitin repeats.; UBQ14; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p69326|ubiq_wheat : 149.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1164.0) & (original description: no original description)


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_100402g0010
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
173723 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
228943 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
A4A49_20717 No alias ubiquitin-40s ribosomal protein s27a 0.04 Orthogroups_2024-Update
At4g02970 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.A02946.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
GRMZM2G005461 No alias ubiquitin 9 0.03 Orthogroups_2024-Update
Glyma.13G176100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Glyma.13G176400 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Glyma.17G042100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
HORVU3Hr1G014150.2 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G014180.3 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
LOC_Os09g25320 No alias ubiquitin family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g27930 No alias ubiquitin fusion protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10000516g0010 No alias (at2g47110 : 160.0) polyubiquitin gene; ubiquitin 6... 0.03 Orthogroups_2024-Update
MA_5869456g0010 No alias (at5g03240 : 181.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
Mp6g03960.1 No alias ubiquitin-fold protein (UBQ) 0.03 Orthogroups_2024-Update
Potri.006G129600 No alias ubiquitin 4 0.04 Orthogroups_2024-Update
Potri.007G067500 No alias related to ubiquitin 1 0.03 Orthogroups_2024-Update
Potri.011G134200 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Potri.017G036800 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.04 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.03 Orthogroups_2024-Update
Seita.1G078900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.2G321300.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G259900.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.002G204200.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.002G292500.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G403700.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.004G050100.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Sobic.005G099100.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G224400.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G223600.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G232100.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.04 Orthogroups_2024-Update
Sopen10g001540 No alias Ubiquitin family 0.02 Orthogroups_2024-Update
evm.model.contig_2285.8 No alias (p00074|cyc_ginbi : 153.0) Cytochrome c - Ginkgo biloba... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 124 195
IPR000626 Ubiquitin_dom 276 347
IPR000626 Ubiquitin_dom 48 119
IPR000626 Ubiquitin_dom 200 271
No external refs found!