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  5. Solyc10g005460

Solyc10g005460


Description : MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g005460
Cluster HCCA clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
A4A49_41919 No alias myb-related protein myb4 0.04 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01426.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.H01064.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G057027 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
GRMZM2G169356 No alias myb domain protein 20 0.04 Orthogroups_2024-Update
GRMZM5G833253 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.05G109200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.10G273000 No alias myb domain protein 62 0.04 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G060600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g19970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g36890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g54520 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_460508g0010 No alias (q7xbh4|myb4_orysa : 200.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.04 Orthogroups_2024-Update
PSME_00013410-RA No alias (at5g35550 : 181.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.04 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00026452-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.05 Orthogroups_2024-Update
PSME_00031962-RA No alias (at4g13480 : 170.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00045448-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.03 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.003G189700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.02 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.06 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.6G063000.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G132600.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284800.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.04 Orthogroups_2024-Update
Seita.8G006900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G279100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Solyc04g077260 No alias blind-like3 0.02 Orthogroups_2024-Update
Solyc07g006750 No alias blind-like8 0.02 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.03 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!