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  5. MA_100985g0010

MA_100985g0010


Description : (at4g13340 : 496.0) Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 637879 Blast hits to 129296 proteins in 3596 species: Archae - 1468; Bacteria - 134638; Metazoa - 215120; Fungi - 74599; Plants - 120849; Viruses - 14592; Other Eukaryotes - 76613 (source: NCBI BLink). & (p93194|rpk1_iponi : 114.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 992.0) & (original description: no original description)


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_100985g0010
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
A4A49_26804 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.02 Orthogroups_2024-Update
At2g15880 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Orthogroups_2024-Update
Brara.H00300.1 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
GRMZM2G341410 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G024380.4 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
HORVU6Hr1G019290.2 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
LOC_Os01g08470 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g41120 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g49100 No alias retrotransposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
Potri.018G075900 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Pp1s118_151V6 No alias MXP5.6; leucine-rich repeat family protein / extensin... 0.01 Orthogroups_2024-Update
Seita.1G092900.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sobic.002G050900.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sobic.003G042200.2 No alias LRR-domain extensin 0.04 Orthogroups_2024-Update
Sobic.003G205600.1 No alias LRR-domain extensin 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 83 115
No external refs found!