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  5. MA_10102675g0010

MA_10102675g0010


Description : (p46259|tba1_pea : 222.0) Tubulin alpha-1 chain - Pisum sativum (Garden pea) & (at4g14960 : 219.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)


Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10102675g0010
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At1g64740 No alias Tubulin alpha-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P11139] 0.03 Orthogroups_2024-Update
PSME_00000844-RA No alias (at1g50010 : 848.0) Encodes alpha-2,4 tubulin. TUA2 and... 0.03 Orthogroups_2024-Update
PSME_00010571-RA No alias (q6vaf9|tba4_goshi : 834.0) Tubulin alpha-4 chain... 0.03 Orthogroups_2024-Update
PSME_00045437-RA No alias (q9zrr5|tba3_horvu : 731.0) Tubulin alpha-3 chain -... 0.03 Orthogroups_2024-Update
Potri.002G111900 No alias tubulin alpha-2 chain 0.03 Orthogroups_2024-Update
Seita.9G073000.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 1 125
No external refs found!