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  5. MA_10143614g0010

MA_10143614g0010


Description : (at5g19160 : 331.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 662.0) & (original description: no original description)


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10143614g0010
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46280 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Brara.A03370.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.03 Orthogroups_2024-Update
GRMZM2G165961 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Glyma.07G257900 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Orthogroups_2024-Update
Glyma.17G016100 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Orthogroups_2024-Update
Glyma.19G149100 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Glyma.19G155000 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
LOC_Os03g19470 No alias proteins of unknown function domain containing protein,... 0.02 Orthogroups_2024-Update
MA_102045g0010 No alias (at5g06700 : 509.0) Encodes a member of the TBL... 0.06 Orthogroups_2024-Update
MA_7200g0010 No alias (at3g06080 : 276.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Potri.001G010900 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Potri.002G195800 No alias TRICHOME BIREFRINGENCE-LIKE 6 0.02 Orthogroups_2024-Update
Potri.006G193900 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Pp1s57_228V6 No alias unknown [Picea sitchensis] 0.02 Orthogroups_2024-Update
Seita.9G429200.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.02 Orthogroups_2024-Update
Sobic.008G033400.1 No alias rhamnogalacturonan-I O-acetyltransferase *(TBL) 0.03 Orthogroups_2024-Update
Sopen01g031190 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen10g031090 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 1 253
No external refs found!