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  5. MA_10178158g0010

MA_10178158g0010


Description : (at5g54510 : 259.0) Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).; DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lqm5|gh31_orysa : 244.0) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1) - Oryza sativa (Rice) & (reliability: 518.0) & (original description: no original description)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10178158g0010
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
At5g13380 No alias Auxin-responsive GH3 family protein... 0.02 Orthogroups_2024-Update
Bradi1g22830 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G092890.5 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.02 Orthogroups_2024-Update
MA_16777g0010 No alias (at1g28130 : 670.0) encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00047176-RA No alias (at2g14960 : 265.0) encodes a protein similar to... 0.01 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.05 Orthogroups_2024-Update
Seita.7G313800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Seita.9G215200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g050290 No alias LOW QUALITY:Auxin-responsive GH3 family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 5 142
No external refs found!