- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at3g26810 : 261.0) auxin signaling F-box 2 (AFB2); FUNCTIONS IN: ubiquitin-protein ligase activity, auxin binding; INVOLVED IN: stamen development, pollen maturation, response to molecule of bacterial origin; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: auxin signaling F-box 3 (TAIR:AT1G12820.1); Has 2856 Blast hits to 1854 proteins in 175 species: Archae - 0; Bacteria - 10; Metazoa - 953; Fungi - 156; Plants - 1568; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)
Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10189662g0010 | |
| Cluster | HCCA clusters: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.D02421.1 | No alias | component *(COI) of jasmonic acid receptor complex | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G151536 | No alias | RNI-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.07G189800 | No alias | F-box/RNI-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g31620 | No alias | OsFBL55 - F-box domain and LRR containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00024313-RA | No alias | (at5g49980 : 738.0) auxin F-box protein 5 (AFB5);... | 0.03 | Orthogroups_2024-Update | |
| Seita.8G132300.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) | 0.03 | Orthogroups_2024-Update | |
| Solyc04g074980 | No alias | TRANSPORT INHIBITOR RESPONSE 1 protein, putative (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Sopen05g031150 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Predicted GO |
| MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |