Solyc10g005960


Description : Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A072UY96_MEDTR)


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g005960
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.04 Orthogroups_2024-Update
A4A49_11805 No alias fasciclin-like arabinogalactan protein 1 0.01 Orthogroups_2024-Update
A4A49_40191 No alias fasciclin-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.04 Orthogroups_2024-Update
Bradi2g23270 No alias Fasciclin-like arabinogalactan family protein 0.03 Orthogroups_2024-Update
Brara.A03323.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Brara.F01805.1 No alias regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 Orthogroups_2024-Update
Glyma.03G129200 No alias cytochrome P450, family 86, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Glyma.14G004200 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
MA_137299g0010 No alias (at3g46550 : 292.0) Isolated in a screen for salt... 0.03 Orthogroups_2024-Update
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
PSME_00028269-RA No alias (at3g60900 : 148.0) FASCICLIN-like... 0.03 Orthogroups_2024-Update
Potri.001G367900 No alias FASCICLIN-like arabinogalactan 1 0.03 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.03 Orthogroups_2024-Update
Seita.3G217100.1 No alias regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Sobic.009G055900.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc03g112880 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g076120 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc07g045440 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g006110 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen07g023980 No alias Fasciclin domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 201 329
No external refs found!