1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g006030

Solyc10g006030


Description : Ribosomal protein S10 (AHRD V3.3 *** A0A103Y4F5_CYNCS)


Gene families : OG_42_0006070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006070_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g006030
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Bradi1g71425 No alias Ribosomal protein S10p/S20e family protein 0.08 Orthogroups_2024-Update
Brara.C03451.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre03.g195650 No alias Ribosomal protein S10p/S20e family protein 0.05 Orthogroups_2024-Update
GRMZM2G047513 No alias Ribosomal protein S10p/S20e family protein 0.02 Orthogroups_2024-Update
Kfl00124_0260 kfl00124_0260_v1.1 (q9m4y3|rr10_mescr : 137.0) 30S ribosomal protein S10,... 0.02 Orthogroups_2024-Update
Potri.011G092800 No alias Ribosomal protein S10p/S20e family protein 0.07 Orthogroups_2024-Update
Pp1s101_174V6 No alias chloroplast 30s ribosomal protein s10 0.04 Orthogroups_2024-Update
Pp1s122_133V6 No alias chloroplast 30s ribosomal protein s10 0.03 Orthogroups_2024-Update
Pp1s9_408V6 No alias chloroplast 30s ribosomal protein s10 0.04 Orthogroups_2024-Update
Seita.9G505300.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Sobic.001G469933.1 No alias component *(uS10c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sopen10g001990 No alias Ribosomal protein S10p/S20e 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 93 187
No external refs found!