Description : (at5g63180 : 429.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 335.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 858.0) & (original description: no original description)
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10205415g0010 | |
Cluster | HCCA clusters: Cluster_254 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_16129 | No alias | putative pectate lyase 18 | 0.03 | Orthogroups_2024-Update | |
A4A49_32410 | No alias | putative pectate lyase p59 | 0.02 | Orthogroups_2024-Update | |
A4A49_35525 | No alias | putative pectate lyase 16 | 0.02 | Orthogroups_2024-Update | |
At4g22080 | No alias | Probable pectate lyase 16... | 0.02 | Orthogroups_2024-Update | |
Brara.G00648.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
GRMZM2G323418 | No alias | Pectate lyase family protein | 0.02 | Orthogroups_2024-Update | |
MA_10437227g0010 | No alias | (at4g24780 : 367.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
MA_91467g0020 | No alias | (at4g24780 : 289.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
Mp8g10190.1 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
PSME_00017512-RA | No alias | (at4g24780 : 545.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00023843-RA | No alias | (at4g13710 : 610.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00029400-RA | No alias | (at5g63180 : 504.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.001G052300 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.004G124100 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.005G064500 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.014G178100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s409_2V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
Pp1s92_84V6 | No alias | F12A21.12; pectate lyase family protein [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
Seita.4G033200.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
Sobic.001G230400.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.01 | Orthogroups_2024-Update | |
Solyc03g111690 | No alias | Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006820 | anion transport | IEP | Predicted GO |
BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006952 | defense response | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009607 | response to biotic stimulus | IEP | Predicted GO |
BP | GO:0009617 | response to bacterium | IEP | Predicted GO |
BP | GO:0009620 | response to fungus | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009733 | response to auxin | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
BP | GO:0015743 | malate transport | IEP | Predicted GO |
BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0040008 | regulation of growth | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
BP | GO:0042742 | defense response to bacterium | IEP | Predicted GO |
BP | GO:0043207 | response to external biotic stimulus | IEP | Predicted GO |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0045926 | negative regulation of growth | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0050832 | defense response to fungus | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0051704 | multi-organism process | IEP | Predicted GO |
BP | GO:0051707 | response to other organism | IEP | Predicted GO |
MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0098542 | defense response to other organism | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 109 | 294 |
No external refs found! |