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Description : (p93417|gam1_orysa : 288.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (at5g06100 : 261.0) Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. When the target site is mutated , expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity.; myb domain protein 33 (MYB33); CONTAINS InterPro DOMAIN/s: Transcription factor, GAMYB (InterPro:IPR016310), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 65 (TAIR:AT3G11440.1); Has 8918 Blast hits to 8315 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 726; Fungi - 466; Plants - 5984; Viruses - 3; Other Eukaryotes - 1739 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)
Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10208000g0010 | |
| Cluster | HCCA clusters: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_08581 | No alias | transcription factor myb36 | 0.03 | Orthogroups_2024-Update | |
| A4A49_19188 | No alias | transcription factor laf1 | 0.02 | Orthogroups_2024-Update | |
| A4A49_20993 | No alias | transcription factor myb39 | 0.02 | Orthogroups_2024-Update | |
| A4A49_27195 | No alias | myb-related protein pp2 | 0.04 | Orthogroups_2024-Update | |
| A4A49_38619 | No alias | transcription factor myb86 | 0.03 | Orthogroups_2024-Update | |
| A4A49_39488 | No alias | myb-related protein pp2 | 0.02 | Orthogroups_2024-Update | |
| AC206901.3_FG005 | No alias | myb domain protein 15 | 0.02 | Orthogroups_2024-Update | |
| At1g66230 | No alias | Transcription factor MYB20... | 0.05 | Orthogroups_2024-Update | |
| At1g74080 | No alias | Transcription factor MYB122... | 0.04 | Orthogroups_2024-Update | |
| At4g38620 | No alias | Transcription repressor MYB4... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g01960 | No alias | myb domain protein 62 | 0.03 | Orthogroups_2024-Update | |
| Bradi2g11676 | No alias | myb domain protein 12 | 0.02 | Orthogroups_2024-Update | |
| Bradi5g21970 | No alias | myb domain protein 50 | 0.02 | Orthogroups_2024-Update | |
| Brara.C01072.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.C04622.1 | No alias | MYB class-R2R3 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.F02110.1 | No alias | MYB class-R2R3 subgroup-1 transcription factor | 0.04 | Orthogroups_2024-Update | |
| Brara.G00519.1 | No alias | MYB class-R2R3 subgroup-2 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.G03164.1 | No alias | MYB class-R2R3 subgroup-1 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.H01124.1 | No alias | MYB class-R2R3 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Cre02.g108350 | No alias | myb domain protein 1 | 0.01 | Orthogroups_2024-Update | |
| GRMZM2G000818 | No alias | myb domain protein 4 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G041415 | No alias | myb domain protein 4 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G104551 | No alias | myb domain protein 42 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G147346 | No alias | myb domain protein 15 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G160838 | No alias | myb domain protein 4 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G162709 | No alias | myb domain protein 62 | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G170100 | No alias | myb domain protein 94 | 0.02 | Orthogroups_2024-Update | |
| Glyma.06G160500 | No alias | myb domain protein 4 | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G312900 | No alias | myb domain protein 65 | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G126900 | No alias | myb domain protein 68 | 0.05 | Orthogroups_2024-Update | |
| Glyma.12G032200 | No alias | myb domain protein 32 | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G237500 | No alias | myb domain protein 83 | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G038100 | No alias | myb domain protein 57 | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G050400 | No alias | myb domain protein 83 | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G066800 | No alias | MYB-like 102 | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G099800 | No alias | myb domain protein 94 | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G022100 | No alias | myb domain protein 30 | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G058620.1 | No alias | MYB class-R2R3 subgroup-2 transcription factor | 0.04 | Orthogroups_2024-Update | |
| LOC_Os02g49986 | No alias | MYB family transcription factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g38210 | No alias | MYB family transcription factor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g46610 | No alias | myb-like DNA-binding domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os07g43580 | No alias | MYB family transcription factor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g33150 | No alias | MYB family transcription factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g47460 | No alias | MYB family transcription factor, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os12g37970 | No alias | MYB family transcription factor, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Potri.008G081600 | No alias | myb domain protein 67 | 0.03 | Orthogroups_2024-Update | |
| Potri.017G128900 | No alias | myb domain protein 6 | 0.04 | Orthogroups_2024-Update | |
| Pp1s277_14V6 | No alias | myb55 (myb domain protein 55) dna binding transcription factor | 0.03 | Orthogroups_2024-Update | |
| Seita.5G034500.1 | No alias | MYB class-R2R3 subgroup-13 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Seita.5G087200.1 | No alias | MYB class-R2R3 subgroup-19/20 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Seita.9G384800.1 | No alias | MYB class-R2R3 subgroup-1 transcription factor | 0.05 | Orthogroups_2024-Update | |
| Sobic.005G155900.1 | No alias | MYB class-R2R3 subgroup-1 transcription factor | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G132600.1 | No alias | MYB class-R2R3 transcription factor | 0.02 | Orthogroups_2024-Update | |
| Solyc11g072060 | No alias | MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) | 0.03 | Orthogroups_2024-Update | |
| Solyc11g073120 | No alias | R2R3MYB transcription factor 58 | 0.03 | Orthogroups_2024-Update | |
| Sopen06g027120 | No alias | Myb-like DNA-binding domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
| BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
| BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |